Full thread dump Java HotSpot(TM) Client VM (1.5.0_12-b04 mixed mode):

"Inactive RequestProcessor thread [Was:Default RequestProcessor/org.netbeans.spi.java.project.support.ui.PackageRootNode]" daemon prio=1 tid=0x08567ef8 nid=0x3842 in Object.wait() [0x7b3fd000..0x7b3fde40]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x8c534118> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x8c534118> (a java.lang.Object)

"Inactive RequestProcessor thread [Was:Default RequestProcessor/null]" daemon prio=1 tid=0x08567bd8 nid=0x3841 in Object.wait() [0x7bd47000..0x7bd480c0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x8c534190> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x8c534190> (a java.lang.Object)

"Inactive RequestProcessor thread [Was:Default RequestProcessor/null]" daemon prio=1 tid=0x08339518 nid=0x3839 in Object.wait() [0x838fc000..0x838fc140]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x891a5ba0> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x891a5ba0> (a java.lang.Object)

"Inactive RequestProcessor thread [Was:TimedSoftReference/org.openide.util.TimedSoftReference]" daemon prio=1 tid=0x082a9d50 nid=0x3838 in Object.wait() [0x7bf7b000..0x7bf7bfc0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x89027590> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x89027590> (a java.lang.Object)

"Inactive RequestProcessor thread [Was:Default RequestProcessor/org.netbeans.spi.java.project.support.ui.PackageRootNode]" daemon prio=1 tid=0x082d04b0 nid=0x3837 in Object.wait() [0x7a418000..0x7a419040]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88e5fae8> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x88e5fae8> (a java.lang.Object)

"Java Source Worker Thread" daemon prio=1 tid=0x7af30c80 nid=0x3836 runnable [0x7a619000..0x7a619ec0]
	at java.lang.Object.hashCode(Native Method)
	at com.sun.tools.javac.code.Type.hashCode(Type.java:224)
	at java.util.HashMap.get(HashMap.java:343)
	at com.sun.tools.javac.code.Types.closure(Types.java:2298)
	at com.sun.tools.javac.comp.Check.checkImplementations(Check.java:1571)
	at com.sun.tools.javac.comp.Check.checkImplementations(Check.java:1563)
	at com.sun.tools.javac.comp.Attr.attribClassBody(Attr.java:2779)
	at com.sun.tools.javac.comp.Attr.attribClass(Attr.java:2709)
	at com.sun.tools.javac.comp.Attr.attribClass(Attr.java:2647)
	at com.sun.tools.javac.comp.Attr.visitClassDef(Attr.java:591)
	at com.sun.tools.javac.tree.JCTree$JCClassDecl.accept(JCTree.java:588)
	at com.sun.tools.javac.comp.Attr.attribTree(Attr.java:391)
	at com.sun.tools.javac.comp.Attr.attribStat(Attr.java:428)
	at com.sun.tools.javac.comp.Attr.attribClassBody(Attr.java:2783)
	at com.sun.tools.javac.comp.Attr.attribClass(Attr.java:2709)
	at com.sun.tools.javac.comp.Attr.attribClass(Attr.java:2647)
	at com.sun.tools.javac.main.JavaCompiler.attribute(JavaCompiler.java:1076)
	at com.sun.tools.javac.main.JavaCompiler.attribute(JavaCompiler.java:1050)
	at com.sun.tools.javac.api.JavacTaskImpl.analyze(JavacTaskImpl.java:445)
	at com.sun.tools.javac.api.JavacTaskImpl.analyze(JavacTaskImpl.java:425)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater.batchCompile(RepositoryUpdater.java:3106)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater.access$4900(RepositoryUpdater.java:159)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker.parseFiles(RepositoryUpdater.java:2137)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker.updateFolder(RepositoryUpdater.java:2237)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker.scanRoots(RepositoryUpdater.java:1792)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker.access$2700(RepositoryUpdater.java:1240)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker$1.run(RepositoryUpdater.java:1389)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker$1.run(RepositoryUpdater.java:1283)
	at org.netbeans.modules.java.source.usages.ClassIndexManager.writeLock(ClassIndexManager.java:99)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker.run(RepositoryUpdater.java:1280)
	at org.netbeans.modules.java.source.usages.RepositoryUpdater$CompileWorker.run(RepositoryUpdater.java:1240)
	at org.netbeans.api.java.source.JavaSource$CompilationJob.run(JavaSource.java:1588)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:417)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:269)
	at java.util.concurrent.FutureTask.run(FutureTask.java:123)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:650)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:675)
	at java.lang.Thread.run(Thread.java:595)

"DestroyJavaVM" prio=1 tid=0x852fd158 nid=0x3812 waiting on condition [0x00000000..0xbfe1a5e0]

"AWT-EventQueue-1" prio=1 tid=0x7b604610 nid=0x382f in Object.wait() [0x7b5fe000..0x7b5ff040]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88b008c8> (a org.netbeans.core.TimableEventQueue)
	at java.lang.Object.wait(Object.java:474)
	at java.awt.EventQueue.getNextEvent(EventQueue.java:345)
	- locked <0x88b008c8> (a org.netbeans.core.TimableEventQueue)
	at java.awt.EventDispatchThread.pumpOneEventForHierarchy(EventDispatchThread.java:189)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:163)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:157)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:149)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:110)

"TimerQueue" daemon prio=1 tid=0x7b6042f0 nid=0x382e in Object.wait() [0x82e42000..0x82e42ec0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88b23630> (a javax.swing.TimerQueue)
	at javax.swing.TimerQueue.run(TimerQueue.java:236)
	- locked <0x88b23630> (a javax.swing.TimerQueue)
	at java.lang.Thread.run(Thread.java:595)

"Inactive RequestProcessor thread [Was:Default RequestProcessor/null]" daemon prio=1 tid=0x081f6408 nid=0x382d in Object.wait() [0x7b945000..0x7b945f40]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88b00988> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x88b00988> (a java.lang.Object)

"Inactive RequestProcessor thread [Was:Default RequestProcessor/null]" daemon prio=1 tid=0x7fbdef10 nid=0x382c in Object.wait() [0x7bb46000..0x7bb46dc0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88ae3658> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x88ae3658> (a java.lang.Object)

"Thread-2" daemon prio=1 tid=0x841f9490 nid=0x3829 in Object.wait() [0x7f420000..0x7f4210c0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88a6c790> (a java.util.LinkedList)
	at java.lang.Object.wait(Object.java:474)
	at java.util.prefs.AbstractPreferences$EventDispatchThread.run(AbstractPreferences.java:1456)
	- locked <0x88a6c790> (a java.util.LinkedList)

"Inactive RequestProcessor thread [Was:Default RequestProcessor/null]" daemon prio=1 tid=0x081d0ab0 nid=0x3827 in Object.wait() [0x7c17d000..0x7c17d140]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88a0d178> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x88a0d178> (a java.lang.Object)

"AWT-Shutdown" prio=1 tid=0x83f239c0 nid=0x3824 in Object.wait() [0x83043000..0x83044040]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x8854d8d8> (a java.lang.Object)
	at java.lang.Object.wait(Object.java:474)
	at sun.awt.AWTAutoShutdown.run(AWTAutoShutdown.java:259)
	- locked <0x8854d8d8> (a java.lang.Object)
	at java.lang.Thread.run(Thread.java:595)

"AWT-XAWT" daemon prio=1 tid=0x0819f5e8 nid=0x3823 runnable [0x83244000..0x83244ec0]
	at sun.awt.X11.XToolkit.waitForEvents(Native Method)
	at sun.awt.X11.XToolkit.run(XToolkit.java:463)
	at sun.awt.X11.XToolkit.run(XToolkit.java:438)
	at java.lang.Thread.run(Thread.java:595)

"Java2D Disposer" daemon prio=1 tid=0x080f2130 nid=0x3822 in Object.wait() [0x834c4000..0x834c4f40]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x88536650> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:116)
	- locked <0x88536650> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:132)
	at sun.java2d.Disposer.run(Disposer.java:125)
	at java.lang.Thread.run(Thread.java:595)

"Active Reference Queue Daemon" daemon prio=1 tid=0x080dd970 nid=0x3821 in Object.wait() [0x84afe000..0x84afedc0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x884fccb0> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:116)
	- locked <0x884fccb0> (a java.lang.ref.ReferenceQueue$Lock)
	at org.openide.util.Utilities$ActiveQueue.run(Utilities.java:3084)
	at java.lang.Thread.run(Thread.java:595)

"Inactive RequestProcessor thread [Was:Default RequestProcessor/org.netbeans.spi.java.project.support.ui.PackageRootNode]" daemon prio=1 tid=0x852fd440 nid=0x381f in Object.wait() [0x83afc000..0x83afd0c0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x884fce20> (a java.lang.Object)
	at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:950)
	- locked <0x884fce20> (a java.lang.Object)

"Timer-0" daemon prio=1 tid=0x852f3e40 nid=0x381e in Object.wait() [0x83cfd000..0x83cfe140]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x884fce90> (a java.util.TaskQueue)
	at java.util.TimerThread.mainLoop(Timer.java:509)
	- locked <0x884fce90> (a java.util.TaskQueue)
	at java.util.TimerThread.run(Timer.java:462)

"CLI Requests Server" daemon prio=1 tid=0x852f3a18 nid=0x381d runnable [0x83efe000..0x83efefc0]
	at java.net.PlainSocketImpl.socketAccept(Native Method)
	at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
	- locked <0x884fcf28> (a java.net.SocksSocketImpl)
	at java.net.ServerSocket.implAccept(ServerSocket.java:450)
	at java.net.ServerSocket.accept(ServerSocket.java:421)
	at org.netbeans.CLIHandler$Server.run(CLIHandler.java:1010)

"Low Memory Detector" daemon prio=1 tid=0x080cb9d0 nid=0x3818 runnable [0x00000000..0x00000000]

"CompilerThread0" daemon prio=1 tid=0x080ca598 nid=0x3817 waiting on condition [0x00000000..0x85414828]

"Signal Dispatcher" daemon prio=1 tid=0x080c95a0 nid=0x3816 waiting on condition [0x00000000..0x00000000]

"Finalizer" daemon prio=1 tid=0x080bee78 nid=0x3815 in Object.wait() [0x85855000..0x85856140]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x884fd1c8> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:116)
	- locked <0x884fd1c8> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:132)
	at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:159)

"Reference Handler" daemon prio=1 tid=0x080bd068 nid=0x3814 in Object.wait() [0x85a56000..0x85a56fc0]
	at java.lang.Object.wait(Native Method)
	- waiting on <0x884fccd8> (a java.lang.ref.Reference$Lock)
	at java.lang.Object.wait(Object.java:474)
	at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116)
	- locked <0x884fccd8> (a java.lang.ref.Reference$Lock)

"VM Thread" prio=1 tid=0x080ba358 nid=0x3813 runnable 

"VM Periodic Task Thread" prio=1 tid=0x85200cc0 nid=0x3819 waiting on condition